Publications with the Minor Lab Go to top

1. Cooper DR, Grabowski M, Zimmerman MD, Porebski PJ, Shabalin IG, Woinska M, Domagalski MJ, Zheng H, Sroka P, Cymborowski M, Czub MP, Niedzialkowska E, Venkataramany BS, Osinski T, Fratczak Z, Bajor J, Gonera J, MacLean E, Wojciechowska K, Konina K, Wajerowicz W, Chruszcz M, Minor W (2020)
   State-of-the-Art Data Management: Improving the Reproducibility, Consistency, and Traceability of Structural Biology and in Vitro Biochemical Experiments.
   Methods in molecular biology (Clifton, N.J.) (): 209-236. [DOI:10.1007/978-1-0716-0892-0_13] [Pub Med ID: 33125653] [Pub Med Central ID: PMC8019398]
   WoS Times Cited: 4 ; Google Scholar Times Cited: 8
2. Majorek KA, Zimmerman MD, Grabowski M, Shabalin I, Zheng H, Minor W (2020)
   Assessment of Crystallographic Structure Quality and Protein–Ligand Complex Structure Validation
   in Structural Biology in Drug Discovery: Methods, Techniques, and Practices (): 253-275. [DOI:10.1002/9781118681121.ch11]
   WoS Times Cited: 5 ; Google Scholar Times Cited: 4
3. Grabowski M, Langner KM, Cymborowski M, Porebski PJ, Sroka P, Zheng H, Cooper DR, Zimmerman MD, Elsliger MA, Burley SK, Minor W (2016)
   A public database of macromolecular diffraction experiments.
   Acta crystallographica. Section D, Structural biology (Pt 11): 1181-1193. [DOI:10.1107/S2059798316014716] [Pub Med ID: 27841751] [Pub Med Central ID: PMC5108346]
   WoS Times Cited: 95 ; Google Scholar Times Cited: 93
4. Grabowski M, Niedzialkowska E, Zimmerman MD, Minor W (2016)
   The impact of structural genomics: the first quindecennial.
   Journal of structural and functional genomics (1): 1-16. [DOI:10.1007/s10969-016-9201-5] [Pub Med ID: 26935210] [Pub Med Central ID: PMC4834271]
   Google Scholar Times Cited: 73
   
5. Hou J, Zheng H, Chruszcz M, Zimmerman MD, Shumilin IA, Osinski T, Demas M, Grimshaw S, Minor W (2015)
   Dissecting the Structural Elements for the Activation of β-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
   Journal of bacteriology (3): 463-76. [DOI:10.1128/JB.00360-15] [Pub Med ID: 26553852] [Pub Med Central ID: PMC4719456]
   WoS Times Cited: 14 ; Google Scholar Times Cited: 21
6. Zheng H, Handing KB, Zimmerman MD, Shabalin IG, Almo SC, Minor W (2015)
   X-ray crystallography over the past decade for novel drug discovery - where are we heading next?
   Expert opinion on drug discovery (9): 975-89. [DOI:10.1517/17460441.2015.1061991] [Pub Med ID: 26177814] [Pub Med Central ID: PMC4655606]
   WoS Times Cited: 57 ; Google Scholar Times Cited: 116
7. Berman HM, Gabanyi MJ, Groom CR, Johnson JE, Murshudov GN, Nicholls RA, Reddy V, Schwede T, Zimmerman MD, Westbrook J, Minor W (2015)
   Data to knowledge: how to get meaning from your result.
   IUCrJ (Pt 1): 45-58. [DOI:10.1107/S2052252514023306] [Pub Med ID: 25610627] [Pub Med Central ID: PMC4285880]
   WoS Times Cited: 10 ; Google Scholar Times Cited: 13
8. Zheng H, Hou J, Zimmerman MD, Wlodawer A, Minor W (2014)
   The future of crystallography in drug discovery.
   Expert opinion on drug discovery (2): 125-37. [DOI:10.1517/17460441.2014.872623] [Pub Med ID: 24372145] [Pub Med Central ID: PMC4106240]
   WoS Times Cited: 64 ; Google Scholar Times Cited: 116
9. Zimmerman MD, Grabowski M, Domagalski MJ, Maclean EM, Chruszcz M, Minor W (2014)
   Data management in the modern structural biology and biomedical research environment.
   Methods in molecular biology (Clifton, N.J.) (): 1-25. [DOI:10.1007/978-1-4939-0354-2_1] [Pub Med ID: 24590705] [Pub Med Central ID: PMC4086192]
   WoS Times Cited: 29 ; Google Scholar Times Cited: 38
10. Domagalski MJ, Zheng H, Zimmerman MD, Dauter Z, Wlodawer A, Minor W (2014)
    The quality and validation of structures from structural genomics.
    Methods in molecular biology (Clifton, N.J.) (): 297-314. [DOI:10.1007/978-1-62703-691-7_21] [Pub Med ID: 24203341] [Pub Med Central ID: PMC4081469]
    WoS Times Cited: 22 ; Google Scholar Times Cited: 29
11. Gront D, Grabowski M, Zimmerman MD, Raynor J, Tkaczuk KL, Minor W (2012)
    Assessing the accuracy of template-based structure prediction metaservers by comparison with structural genomics structures.
    Journal of structural and functional genomics (4): 213-25. [DOI:10.1007/s10969-012-9146-2] [Pub Med ID: 23086054] [Pub Med Central ID: PMC4105012]
    Google Scholar Times Cited: 12
12. Majorek KA, Porebski PJ, Dayal A, Zimmerman MD, Jablonska K, Stewart AJ, Chruszcz M, Minor W (2012)
    Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
    Molecular immunology (3-4): 174-82. [DOI:10.1016/j.molimm.2012.05.011] [Pub Med ID: 22677715] [Pub Med Central ID: PMC3401331]
    WoS Times Cited: 724 ; Google Scholar Times Cited: 1,062
13. Klimecka MM, Chruszcz M, Font J, Skarina T, Shumilin I, Onopryienko O, Porebski PJ, Cymborowski M, Zimmerman MD, Hasseman J, Glomski IJ, Lebioda L, Savchenko A, Edwards A, Minor W (2011)
    Structural analysis of a putative aminoglycoside N-acetyltransferase from Bacillus anthracis.
    Journal of molecular biology (3): 411-23. [DOI:10.1016/j.jmb.2011.04.076] [Pub Med ID: 21601576] [Pub Med Central ID: PMC3131501]
    WoS Times Cited: 12 ; Google Scholar Times Cited: 18
14. Gabanyi MJ, Adams PD, Arnold K, Bordoli L, Carter LG, Flippen-Andersen J, Gifford L, Haas J, Kouranov A, McLaughlin WA, Micallef DI, Minor W, Shah R, Schwede T, Tao YP, Westbrook JD, Zimmerman M, Berman HM (2011)
    The Structural Biology Knowledgebase: a portal to protein structures, sequences, functions, and methods.
    Journal of structural and functional genomics (2): 45-54. [DOI:10.1007/s10969-011-9106-2] [Pub Med ID: 21472436] [Pub Med Central ID: PMC3123456]
    Google Scholar Times Cited: 86
15. Cymborowski M, Klimecka M, Chruszcz M, Zimmerman MD, Shumilin IA, Borek D, Lazarski K, Joachimiak A, Otwinowski Z, Anderson W, Minor W (2010)
    To automate or not to automate: this is the question.
    Journal of structural and functional genomics (3): 211-21. [DOI:10.1007/s10969-010-9092-9] [Pub Med ID: 20526815] [Pub Med Central ID: PMC2921494]
    Google Scholar Times Cited: 27
16. Sledź P, Kamiński R, Chruszcz M, Zimmerman MD, Minor W, Woźniak K (2010)
    An experimental charge density of HEPES.
    Acta crystallographica. Section B, Structural science (Pt 4): 482-92. [DOI:10.1107/S0108768110023025] [Pub Med ID: 20631430]
    WoS Times Cited: 16 ; Google Scholar Times Cited: 21
17. Sledz P, Zheng H, Murzyn K, Chruszcz M, Zimmerman MD, Chordia MD, Joachimiak A, Minor W (2010)
    New surface contacts formed upon reductive lysine methylation: improving the probability of protein crystallization.
    Protein science : a publication of the Protein Society (7): 1395-404. [DOI:10.1002/pro.420] [Pub Med ID: 20506323] [Pub Med Central ID: PMC2974831]
    WoS Times Cited: 27 ; Google Scholar Times Cited: 45
18. Luo HB, Zheng H, Zimmerman MD, Chruszcz M, Skarina T, Egorova O, Savchenko A, Edwards AM, Minor W (2010)
    Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum.
    Journal of structural biology (3): 304-11. [DOI:10.1016/j.jsb.2009.11.008] [Pub Med ID: 19932181] [Pub Med Central ID: PMC2830209]
    WoS Times Cited: 12 ; Google Scholar Times Cited: 15
19. Koclega KD, Chruszcz M, Zimmerman MD, Bujacz G, Minor W (2009)
    'Hot' macromolecular crystals.
    Crystal growth & design (2): 580. [DOI:10.1021/cg900971h] [Pub Med ID: 20161694] [Pub Med Central ID: PMC2809425]
    WoS Times Cited: 5 ; Google Scholar Times Cited: 9
20. Wang S, Kirillova O, Chruszcz M, Gront D, Zimmerman MD, Cymborowski MT, Shumilin IA, Skarina T, Gorodichtchenskaia E, Savchenko A, Edwards AM, Minor W (2009)
    The crystal structure of the AF2331 protein from Archaeoglobus fulgidus DSM 4304 forms an unusual interdigitated dimer with a new type of alpha + beta fold.
    Protein science : a publication of the Protein Society (11): 2410-9. [DOI:10.1002/pro.251] [Pub Med ID: 19768810] [Pub Med Central ID: PMC2788295]
    WoS Times Cited: 2 ; Google Scholar Times Cited: 4
21. Grabowski M, Chruszcz M, Zimmerman MD, Kirillova O, Minor W (2009)
    Benefits of structural genomics for drug discovery research.
    Infectious disorders drug targets (5): 459-74. [Pub Med ID: 19594422] [Pub Med Central ID: PMC2866842]
    Google Scholar Times Cited: 37
22. Chruszcz M, Zimmerman MD, Wang S, Koclega KD, Zheng H, Evdokimova E, Kudritska M, Cymborowski M, Savchenko A, Edwards A, Minor W (2008)
    Function-biased choice of additives for optimization of protein crystallization - the case of the putative thioesterase PA5185 from Pseudomonas aeruginosa PAO1.
    Crystal growth & design (11): 4054-4061. [DOI:10.1021/cg800430f] [Pub Med ID: 19898606] [Pub Med Central ID: PMC2700756]
    WoS Times Cited: 2 ; Google Scholar Times Cited: 5
23. Beloglazova N, Brown G, Zimmerman MD, Proudfoot M, Makarova KS, Kudritska M, Kochinyan S, Wang S, Chruszcz M, Minor W, Koonin EV, Edwards AM, Savchenko A, Yakunin AF (2008)
    A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats.
    The Journal of biological chemistry (29): 20361-71. [DOI:10.1074/jbc.M803225200] [Pub Med ID: 18482976] [Pub Med Central ID: PMC2459268]
    WoS Times Cited: 154 ; Google Scholar Times Cited: 269
24. Zimmerman MD, Proudfoot M, Yakunin A, Minor W (2008)
    Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli.
    Journal of molecular biology (1): 215-26. [DOI:10.1016/j.jmb.2008.02.036] [Pub Med ID: 18353368] [Pub Med Central ID: PMC2504004]
    WoS Times Cited: 58 ; Google Scholar Times Cited: 89
25. Chruszcz M, Potrzebowski W, Zimmerman MD, Grabowski M, Zheng H, Lasota P, Minor W (2008)
    Analysis of solvent content and oligomeric states in protein crystals--does symmetry matter?
    Protein science : a publication of the Protein Society (4): 623-32. [DOI:10.1110/ps.073360508] [Pub Med ID: 18359856] [Pub Med Central ID: PMC2271157]
    WoS Times Cited: 52 ; Google Scholar Times Cited: 77
26. Koclega KD, Chruszcz M, Zimmerman MD, Cymborowski M, Evdokimova E, Minor W (2007)
    Crystal structure of a transcriptional regulator TM1030 from Thermotoga maritima solved by an unusual MAD experiment.
    Journal of structural biology (3): 424-32. [DOI:10.1016/j.jsb.2007.04.012] [Pub Med ID: 17588774] [Pub Med Central ID: PMC2093942]
    WoS Times Cited: 5 ; Google Scholar Times Cited: 14
27. Petkowski JJ, Chruszcz M, Zimmerman MD, Zheng H, Skarina T, Onopriyenko O, Cymborowski MT, Koclega KD, Savchenko A, Edwards A, Minor W (2007)
    Crystal structures of TM0549 and NE1324--two orthologs of E. coli AHAS isozyme III small regulatory subunit.
    Protein science : a publication of the Protein Society (7): 1360-7. [DOI:10.1110/ps.072793807] [Pub Med ID: 17586771] [Pub Med Central ID: PMC2206681]
    WoS Times Cited: 17 ; Google Scholar Times Cited: 24
28. Doyle CR, Zimmerman MD, Chruszcz M, Cymborowski M, Gawlicka-Chruszcz A, Minor W (2006)
    Crystal structure of 6-(4-difluoromethoxy-3-methoxyphenyl)-3(2H)-pyridazinone,C12H10F2N2O3.
    Zeitschrift fur Kristallographie (): 359-360. [DOI:10.1524/ncrs.2006.0109]
    WoS Times Cited: 0 ; Google Scholar Times Cited: 0
29. Zimmerman MD, Chruszcz M, Cymborowski M, Zheng HP, Minor W (2006)
    Disodium 4-nitrophenylphosphate hexahydrate.
    Acta crystallographica. Section E, Structure reports online (): M884-M886. [DOI:10.1107/S160053680600941X]
    WoS Times Cited: 1 ; Google Scholar Times Cited: 1

Structures with the Minor Lab Go to top